Simulation: SEM2 / SEM3#
The subcellular element method classes. Each cell is a collection of elements interacting through Lennard-Jones potentials; relaxing the system reconstructs cell shapes and the cell-cell contact graph, and yields the forces between neighboring cells.
Both classes inherit from CellBase, which holds the geometry
(xc, xe, ecid, contact_matrix, alphashape, …); those attributes are
listed on each class page.
Note
sim_gpu() requires a CUDA-capable GPU and NUMBA_CUDA_USE_NVIDIA_BINDING=1.
See Before you run a simulation.